// Numbas version: exam_results_page_options {"name": "Christian's copy of Paired t-test after treatment.", "extensions": ["stats"], "custom_part_types": [], "resources": [], "navigation": {"allowregen": true, "showfrontpage": false, "preventleave": false, "typeendtoleave": false}, "question_groups": [{"pickingStrategy": "all-ordered", "questions": [{"functions": {"pstdev": {"definition": "sqrt(abs(l)/(abs(l)-1))*stdev(l)", "type": "number", "language": "jme", "parameters": [["l", "list"]]}}, "name": "Christian's copy of Paired t-test after treatment.", "tags": ["average", "data analysis", "differences", "elementary statistics", "hypothesis testing", "mean", "mean of differences", "paired t-test", "standard deviation", "standard deviation of differences", "statistics", "stats", "t-test", "variance"], "advice": "\n

The table of differences is given by:

\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n
{object}ABCDEFGHIJKLMNO
Before$\\var{r1[0]}$$\\var{r1[1]}$$\\var{r1[2]}$$\\var{r1[3]}$$\\var{r1[4]}$$\\var{r1[5]}$$\\var{r1[6]}$$\\var{r1[7]}$$\\var{r1[8]}$$\\var{r1[9]}$$\\var{r1[10]}$$\\var{r1[11]}$$\\var{r1[12]}$$\\var{r1[13]}$$\\var{r1[14]}$
After$\\var{r2[0]}$$\\var{r2[1]}$$\\var{r2[2]}$$\\var{r2[3]}$$\\var{r2[4]}$$\\var{r2[5]}$$\\var{r2[6]}$$\\var{r2[7]}$$\\var{r2[8]}$$\\var{r2[9]}$$\\var{r2[10]}$$\\var{r2[11]}$$\\var{r2[12]}$$\\var{r2[13]}$$\\var{r2[14]}$
Differences$\\var{d[0]}$$\\var{d[1]}$$\\var{d[2]}$$\\var{d[3]}$$\\var{d[4]}$$\\var{d[5]}$$\\var{d[6]}$$\\var{d[7]}$$\\var{d[8]}$$\\var{d[9]}$$\\var{d[10]}$$\\var{d[11]}$$\\var{d[12]}$$\\var{d[13]}$$\\var{d[14]}$
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The mean of the differences is $\\overline{x_d}=\\var{meandiff}$.

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The variance $V$ of the differences is
\\[\\begin{eqnarray*} V&=&\\frac{1}{14}\\left(\\simplify[]{{d[0]^2}+{d[1]^2}+{d[2]^2}+{d[3]^2}+{d[4]^2}+{d[5]^2}+{d[6]^2}+{d[7]^2}+{d[8]^2}+{d[9]^2}+{d[10]^2}+{d[11]^2}+{d[12]^2}+{d[13]^2}+{d[14]^2}}-15\\times \\var{meandiff}^2\\right)\\\\ &=&\\var{variance(d)} \\end{eqnarray*} \\]
Hence we have the standard deviation $s_d= \\sqrt{V}=\\var{stdiff}$ to 3 decimal places.

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The paired t-statistic is given by:

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\\[t_d=\\frac{\\overline{x_d}-\\mu_d}{\\frac{s_d}{\\sqrt{n}}}\\]

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In this example $n=15$ and the null hypothesis is that the means are the same i.e. $\\mu_d=0$.

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On calculating we find $t_d=\\var{tvalue}$.

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Looking up this value on the T-distribution table for $t_{14}$

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\\[\\begin{array}{r|rrrrr}&0.20&0.10&0.05&0.01&0.001\\\\\\hline14&1.345&1.761&2.145&2.977&4.140\\end{array}\\]

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We see that the t-statistic {msg[t]} and the table tells us that the $p$ value {pmsg[t]}.

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Hence we conclude that {cmsg[t]}

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\n ", "rulesets": {"std": ["all", "fractionNumbers", "!collectNumbers", "!noLeadingMinus"]}, "parts": [{"prompt": "\n

Find the mean and standard deviations of the difference between the before and after responses

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Calculate differences for after response– before response.

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Mean of difference = [[0]] (input  to 3 decimal places )

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Standard deviation of difference = [[1]] (input to 3 decimal places)

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Now find the paired t-test statistic  using the values you have just calculated =[[2]] (3 decimal places)

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\n ", "gaps": [{"minvalue": "{meandiff}", "type": "numberentry", "maxvalue": "{meandiff}", "marks": 0.5, "showPrecisionHint": false}, {"minvalue": "{stdiff}", "type": "numberentry", "maxvalue": "{stdiff}", "marks": 0.5, "showPrecisionHint": false}, {"minvalue": "{tvalue}", "type": "numberentry", "maxvalue": "{tvalue}", "marks": 1.0, "showPrecisionHint": false}], "type": "gapfill", "marks": 0.0}, {"maxanswers": 0.0, "displaycolumns": 0.0, "prompt": "

Give the value of the t-statistic you have found, choose the range for the $p$ value by looking up the t-statistic tables:

", "matrix": "v", "shufflechoices": false, "minanswers": 0.0, "choices": ["

$p$ is greater than $10\\%$

", "

$p$ lies between $5 \\%$ and $10\\%$

", "

$p$ lies between $1 \\%$ and $5\\%$

", "

$p$ lies between $0.1 \\%$ and $1\\%$

", "

$p$ is less than $0.1 \\%$

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Given the $p$-value and the range you have found, what is the strength of evidence against the null hypothesis that there is a difference in the average responses of the two groups?

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Suppose that 15 individuals, diagnosed with bipolar disorder take part in an experiment that grades their happiness on a scale from 1 to 25. They take the test before treatment and then again after a specific drug has been prescribed. The data is shown below:

\n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n \n
{object}ABCDEFGHIJKLMNO
Before$\\var{r1[0]}$$\\var{r1[1]}$$\\var{r1[2]}$$\\var{r1[3]}$$\\var{r1[4]}$$\\var{r1[5]}$$\\var{r1[6]}$$\\var{r1[7]}$$\\var{r1[8]}$$\\var{r1[9]}$$\\var{r1[10]}$$\\var{r1[11]}$$\\var{r1[12]}$$\\var{r1[13]}$$\\var{r1[14]}$
After$\\var{r2[0]}$$\\var{r2[1]}$$\\var{r2[2]}$$\\var{r2[3]}$$\\var{r2[4]}$$\\var{r2[5]}$$\\var{r2[6]}$$\\var{r2[7]}$$\\var{r2[8]}$$\\var{r2[9]}$$\\var{r2[10]}$$\\var{r2[11]}$$\\var{r2[12]}$$\\var{r2[13]}$$\\var{r2[14]}$
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QUESTION: Is there a difference between the average responses of the two groups? In order to do this answer the following questions:

\n ", "variable_groups": [], "progress": "in-progress", "type": "question", "variables": {"t95": {"definition": 2.145, "name": "t95"}, "tvalue": {"definition": "precround(abs(tscore(0,d)),3)", "name": "tvalue"}, "msg": {"definition": "['is greater than $\\\\var{t999}$','lies between $\\\\var{t99}$ and $\\\\var{t999}$','lies between $\\\\var{t95}$ and $\\\\var{t99}$','lies between $\\\\var{t90}$ and $\\\\var{t95}$','is less than $\\\\var{t90}$']", "name": "msg"}, "t999": {"definition": 4.14, "name": "t999"}, "meandiff": {"definition": "precround(mean(d),3)", "name": "meandiff"}, "object": {"definition": "'Individual'", "name": "object"}, "sig1": {"definition": "random(2..3#0.2)", "name": "sig1"}, "thismany": {"definition": 15.0, "name": "thismany"}, "stdiff": {"definition": "precround(pstdev(d),3)", "name": "stdiff"}, "sig2": {"definition": "random(2..3#0.2)", "name": "sig2"}, "t99": {"definition": 2.977, "name": "t99"}, "attempt": {"definition": "'hand'", "name": "attempt"}, "t90": {"definition": 1.761, "name": "t90"}, "cmsg": {"definition": "['A','B','C','D','E']", "name": "cmsg"}, "r1": {"definition": "repeat(min(round(normalsample(mu1,sig1)),25),15)", "name": "r1"}, "mu1": {"definition": "random(10..14#0.5)", "name": "mu1"}, "d": {"definition": "list(vector(r2)-vector(r1))", "name": "d"}, "r2": {"definition": "repeat(min(round(normalsample(mu2,sig2)),25),15)", "name": "r2"}, "mu2": {"definition": "mu1+random(2..4#0.1)", "name": "mu2"}, "pmsg": {"definition": "[' is less than $0.001$',' lies between $0.001$ and $0.01$',' lies between $0.01$ and $0.05$',' lies between $0.05$ and $0.10$',' is greater than $0.10$']", "name": "pmsg"}, "objects": {"definition": "'individuals'", "name": "objects"}, "t": {"definition": "switch(v[0]=1,0,v[1]=1,1,v[2]=1,2,v[3]=1,3,4)", "name": "t"}, "v": {"definition": "if(tvalue>=t999,[1,0,0,0,0],if(tvalue>=t99,[0,1,0,0,0],if(tvalue>=t95,[0,0,1,0,0],if(tvalue>=t90,[0,0,0,1,0],[0,0,0,0,1]))))", "name": "v"}, "pvalue": {"definition": "precround(ttest(0,d,2),3)", "name": "pvalue"}}, "metadata": {"notes": "

11/07/2012:

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Added tags.

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Calculation not yet tested.

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23/07/2012:

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Added description.

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Checked calculation.

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Changed display slightly in Advice.

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3/08/2012:

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Added tags.

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Question appears to be working correctly.

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26/01/2013:

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Advice needs to be finished.

", "description": "

Paired t-test to see if there is a difference between responses after treatment.

", "licence": "Creative Commons Attribution 4.0 International"}, "showQuestionGroupNames": false, "question_groups": [{"name": "", "pickingStrategy": "all-ordered", "pickQuestions": 0, "questions": []}], "contributors": [{"name": "Christian Lawson-Perfect", "profile_url": "https://numbas.mathcentre.ac.uk/accounts/profile/7/"}]}]}], "contributors": [{"name": "Christian Lawson-Perfect", "profile_url": "https://numbas.mathcentre.ac.uk/accounts/profile/7/"}]}